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Species belonging to selected taxon:
Daphnia pulex
,
Artemia franciscana
,
Daphnia magna
ABOUT THIS RECORD
ID:
MNEST035039
species:
Daphnia pulex
miRNA family:
miR-iab
source:
miRBase, original name:
dpu-mir-iab-4
(
MI0012258
)
Taxonomy by NCBI:
Daphnia pulex
Daphnia
Daphniidae
Anomopoda
Cladocera
Diplostraca
Phyllopoda
Branchiopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGTATACCTTCAGTATACGTAAC
miRNA*
ACGTATACTGAATGTATCCTGA
mismatches:
4
bulges:
1
View larger
pre-miRNA
TGGATGTTTAACCCCCTGG
ACGTATACTGAATGTATCCTGA
GCTTCATTCATTC
CGGTATACCTTCAGTATACGTAAC
AGGAGGCAACACTTTCAAC
dot-bracket secondary structure
((((.((....((.((((.
((((((((((((.((((((.((
(.........)))
.)).)))).))))))))))))..)
))).))....)).))))..
SIMILARITIES
miRBase
dpu-mir-iab-4
:
3e-50
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-iab-4: 2e-17
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"