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Species belonging to selected taxon:
Branchiostoma floridae
ABOUT THIS RECORD
ID:
MNEST024691
species:
Branchiostoma floridae
source:
miRBase, original name:
bfl-mir-193b
(
MI0017628
)
Taxonomy by NCBI:
Branchiostoma floridae
Branchiostoma
Branchiostomidae
Cephalochordata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTGGCCTGTCAAGTCGGTGT
miRNA*
AGTGACTTGTGGGGTCAGTCGG
mismatches:
4
bulges:
0
View larger
pre-miRNA
ACTTGTGAAC
AGTGACTTGTGGGGTCAGTCGG
TAGAAAGAGATTTTCC
TACTGGCCTGTCAAGTCGGTGT
TCACATGA
dot-bracket secondary structure
.(.(((((((
(.(((((((..((((((((.((
.((((.....))))))
.))))))))..))))))).)))
))))).).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"