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Species belonging to selected taxon:
Branchiostoma floridae
ABOUT THIS RECORD
ID:
MNEST007109
species:
Branchiostoma floridae
miRNA family:
mir-433
source:
miRNEST
Taxonomy by NCBI:
Branchiostoma floridae
Branchiostoma
Branchiostomidae
Cephalochordata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTCATGGTGGGCTCCTCGGTA
miRNA*
CCTTTTGGCACCATGGCCG
mismatches:
4
bulges:
2
View larger
pre-miRNA
GTCGTTCTTCCCCGGCCTCATCTACGCGATCTTGGGAACTTCGAAAAATCTA
CCTTTTGGCACCATGGCCG
TTGTGAGC
GTCATGGTGGGCTCCTCGGTA
GAACGGCTGGTTCCTGAGAGAACGGGTCTGCCGGCGATGTCTGACAACA
dot-bracket secondary structure
((((....((.(((((...((((......((((((((((((((.....((((
((....(((((((((((.(
(.....))
))))))))..)))....))))
)).)))..)))))))))))....))))..))))).))....))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record