miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Branchiostoma floridae



ABOUT THIS RECORD

ID: MNEST007121
species: Branchiostoma floridae
miRNA family: miR-2343
source: miRNEST

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCGGGGAGACGGTGGAACTTT

miRNA*
AAACCGCCTTCAACCCGTGC

mismatches: 5
bulges: 1

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pre-miRNA
TCGTCCCCGGATCCCGTCCTGACCCAGAAACCGCCTTCAACCCGTGCGGATACTCCGCAAACATGGTGTCCCCGATCCACGCCGTCACAGTTAGCGGGGA
GACGGTGGAACTTT
GGGCGGGAACACAGAGAGGGGCCCTCCAG


dot-bracket secondary structure
..(.((((...((...(((((.((((((..(((((.((..((((((((((...))))).((((((((((.........)))))))....))).)))))..
)).)))))...)))
)))))))).....))..))))).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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