ABOUT THIS RECORDspecies: Branchiostoma floridae
miRNA family: mir-4868
source: miRBase, original name: bfl-mir-4868a (MI0017623)
Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGCTCCAGCGCTGATCAGTGA miRNA* CTGATCAGCCCGGAAGCTGTTA mismatches: 3 bulges: 3 |
pre-miRNA
TTCTCGCCCCTGATCAGCCCGGAAGCTGTTACGTCACTTCCGTTGTATCAGCTCCAGCGCTGATCAGTGACGCGGTG
dot-bracket secondary structure
...((((.(((((((((((.(((.((((.((((.(......).)))).))))))).).))))))))).)..))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M, Evol Dev. 13:15-27(2011)., "microRNA complements in deuterostomes: origin and evolution of microRNAs"
TTCTCGCCCCTGATCAGCCCGGAAGCTGTTACGTCACTTCCGTTGTATCAGCTCCAGCGCTGATCAGTGACGCGGTG
dot-bracket secondary structure
...((((.(((((((((((.(((.((((.((((.(......).)))).))))))).).))))))))).)..))))..
SIMILARITIES| miRBase bfl-mir-4868b: 0.00000000000006 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M, Evol Dev. 13:15-27(2011)., "microRNA complements in deuterostomes: origin and evolution of microRNAs"
