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Species belonging to selected taxon:
Branchiostoma floridae
ABOUT THIS RECORD
ID:
MNEST024748
species:
Branchiostoma floridae
miRNA family:
mir-4872
source:
miRBase, original name:
bfl-mir-4872a
(
MI0017630
)
Taxonomy by NCBI:
Branchiostoma floridae
Branchiostoma
Branchiostomidae
Cephalochordata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCGGGATAACTAAAACTCTGA
miRNA*
AGAGTTTTGGTACCCCGGCTCC
mismatches:
3
bulges:
1
View larger
pre-miRNA
CTAGGTTCACATGCAG
TGCCGGGATAACTAAAACTCTGA
GTTCTGTTTACTTC
AGAGTTTTGGTACCCCGGCTCC
ATATGGAACTACT
dot-bracket secondary structure
...(((((.((((..(
.((((((...(((((((((((((
((.......)).))
)))))))))))..)))))).).
.)))))))))...
SIMILARITIES
miRBase
bfl-mir-4872b
:
0.00000000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"