ABOUT THIS RECORDspecies: Branchiostoma floridae
miRNA family: mir-2574
source: miRNEST
Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAATACAAAATGGAGAGCCCG miRNA* GGCTTTCTATTTTGTCATTTT mismatches: 2 bulges: 0 |
pre-miRNA
CCGGTTGTTTTTTTAGTCGTTTTTATTGGGCTTTCTATTTTGTCATTTTTCTTGAAGTACGCCAGCCAAACTTGACACAGCAAGATAAAATACAAAATGG
AGAGCCCGATAAAAACGACTAAAAAACGTTTTAAGAA
dot-bracket secondary structure
..((.((((((((.(((((((((((((((((((((((((((((..(((.(((((..((..................))..))))).)))..)))))))))
))))))))))))))))))))))))))))..)).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCGGTTGTTTTTTTAGTCGTTTTTATTGGGCTTTCTATTTTGTCATTTTTCTTGAAGTACGCCAGCCAAACTTGACACAGCAAGATAAAATACAAAATGG
AGAGCCCGATAAAAACGACTAAAAAACGTTTTAAGAA
dot-bracket secondary structure
..((.((((((((.(((((((((((((((((((((((((((((..(((.(((((..((..................))..))))).)))..)))))))))
))))))))))))))))))))))))))))..)).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
