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Species belonging to selected taxon:

Bruguiera gymnorhiza



ABOUT THIS RECORD

ID: MNEST002853
species: Bruguiera gymnorhiza
miRNA family: MIRf511
source: miRNEST

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAAGAATTGTAAAGAGGGGAT

miRNA*
 TCCCTCTTCATTTTCTTCCC

mismatches: 4
bulges: 1
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pre-miRNA
 AAAATATCCCTCTTCATTTTCTTCCCATCCTCGTCCCACCTGGAATTCGGAATCCCATCAAACTCGAGATTCCACAAATCACTGACAGAACTCCATTCCC
TTGTGCCTGATTCGCATCGTTTTGATGCAATCATCATCGTCCGATCCACCTAATGTCCCCGGCTGATCGGGCGACTGGTCAAAATAAAAGAAAAGAAAGA
AAGCATTCTTACGGTCTGCCTTAACACGACGCGGAAGAATTGTAAAGAGGGGATAAA

dot-bracket secondary structure
......((((((((.((.(((((((..(((..((...))..)))....((((((...((......))))))))...(((((...((((............
))))...))))).((.((((.((((.(((...(((.((((((((((..((..........))..))))))))))((..((.........))..)).((((
(....)))))..))).))).)))).)))).)))))))))..)).)))))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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