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Species belonging to selected taxon:

Bruguiera gymnorhiza



ABOUT THIS RECORD

ID: MNEST002862
species: Bruguiera gymnorhiza
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGATAGAGAGCAC

miRNA*
GCTCTCTATGCTTCTGTCATCA

mismatches: 1
bulges: 1

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pre-miRNA
GGGATTGGGGACTTGGGGAGAGGGAGAGGAGGCACTGCTGATGCTGTTTGACAGAAGATAGAGAGCACAGATGATGATGTGCAATTTTTGGATTCTGCAT
CTCACTCCTTTGTGCTCTCTATGCTTCTGTCATCACCTTTAGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTAGG


dot-bracket secondary structure
((((..(((((....(((((((((((((((((....(((((...((..(((((((((((((((((((((((.(((((.(((((............)))))
.))).)).)))))))))))))).))))))))).))...)))))...)))))))))))))))))))))).))))......



SIMILARITIES
miRBase rco-MIR156h: 8e-31

PMRD ptc-miR156j: 8e-28

microPC miR157: 9e-43
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR156 from microPC (MNEST045004)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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