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Species belonging to selected taxon:

Bruguiera gymnorhiza



ABOUT THIS RECORD

ID: MNEST045040
species: Bruguiera gymnorhiza
miRNA family: MIR396
source: microPC, original name: miR396

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACT

miRNA*
TTCAATAAAGCTGTGGGA

mismatches: 1
bulges: 0

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pre-miRNA
TTCCACAGCTTTCTTGAACTGCATCTCTTAGATTTGTTTTTGCATGCCACGGTTTCTGGCTGGACGACTTGTGGATTTGCGGTTCAATAAAGCTGTGGGA


dot-bracket secondary structure
((((((((((((.((((((((((..(((..((.((((((......((((.......)))).)))))).))..)))..)))))))))).))))))))))))



SIMILARITIES
miRBase zma-MIR396h: 0.000000005

PMRD zma-miR396l: 0.000000005

microPC miR396: 5e-52
UniProt no hits

RFAM MIR396: 0.00000009

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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