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Species belonging to selected taxon:
Caligus rogercresseyi
ABOUT THIS RECORD
ID:
MNEST009428
species:
Caligus rogercresseyi
miRNA family:
mir-1322
source:
miRNEST
Taxonomy by NCBI:
Caligus rogercresseyi
Caligus
Caligidae
Siphonostomatoida
Podoplea
Neocopepoda
Copepoda
Maxillopoda
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GATGCTGCTGCTGATTCAGGT
miRNA*
CAGAGTAGTAGTAGTTTTTCT
mismatches:
2
bulges:
2
View larger
pre-miRNA
TTCATCGGGAG
GATGCTGCTGCTGATTCAGGT
ATCCATAAAGGTAAACTGGATGGTCATGATGATGATTAACGAATGTATGAATTGAGGACTCCAC
CAGA
GTAGTAGTAGTTTTTCT
TTTATAAA
dot-bracket secondary structure
......(((((
((.(((((((((.((((.(((
.(((.(((...((.((....(((((((....)))))))......)).))..))).)))....))
).))
)))))))))))..))))
))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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