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Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002954
species: Centaurea solstitialis
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCATA

miRNA*
 TGCTCACTTCTCTTGCTGTCAGC

mismatches: 0
bulges: 2
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pre-miRNA
 AGATAGAAAGCTGACAGAAGAGAGTGAGCATATGCAAAGCAATTGTATAGAAAAACTATACATTTGTTGGAATTATGCGTGTGCTCACTTCTCTTGCTGT
CAGCTATACCCT

dot-bracket secondary structure
........((((((((((((((((((((((((((((.(((((.(((((((.....))))))).))))).......))))))))))))).)))))).))))
))))).......


SIMILARITIES
miRBase zma-MIR156c: 0.0000003

PMRD zma-miR156c: 0.0000003

microPC miR156: 1e-46		UniProt no hits

RFAM mir-156: 0.0004		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST045062)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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