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Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002959
species: Centaurea solstitialis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCACTGCCTCTTCCCTGGCT

miRNA*
ACAGGGACGAGACAGAGCCCG

mismatches: 5
bulges: 0

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pre-miRNA
TTTGCGTGATTTTAATGGTATAGATGGAGATGTGAGGGTAGACAGGGACGAGACAGAGCCCGAAAAAGCCTAGTCAATACTTGGGTCAGTATTGTTGTCT
TTTTCATGCACTGCCTCTTCCCTGGCTATCCTCTTCTCTCTATACTCGTGTTGTTTGATTATGTT


dot-bracket secondary structure
...((((((((.((((((((((((..((((...((((((((.((((((.(((.(((.((..(((((((..(((.(((((((......)))))))))).))
)))))..)).))).))).)))))).)))))))).))))))))))))...))))...)))))))).



SIMILARITIES
miRBase ahy-MIR408: 0.000002

PMRD ppt-miR408b: 0.000002

microPC miR408: 0.000002
UniProt no hits

RFAM MIR408: 0.00004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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