miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002957
species: Centaurea solstitialis
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTACTCCCTCTGTCCCAAAAG

miRNA*
CTTGGACGGAGGGAGTAATG

mismatches: 2
bulges: 1

View larger
pre-miRNA
CTAGAATTTGTGTACTCCCTCTGTCCCAAAAGAGGTGTCCACTTTCAAACTACGGGATTGAGATACTCCTTACTCCACCTATAATCAAGGGCAAACTGTA
GAAACCCAAAACTGTGATAATTATACATCTCTAGAACTATGCCTTTCTCATCGCGTACATCTCTCTTGGACGGAGGGAGTAATGTATAAGAG


dot-bracket secondary structure
......((((((((((((((((((((.((.((((((((.............(((.(((.((((........................((((((..(((.(
((..........((((.......))))))).))).....))))))))))))).))))))))))).))))))))))))))))...))))))..



SIMILARITIES
miRBase osa-MIR1862d: 0.0006

PMRD osa-miR1862d: 0.0006

microPC no hits
UniProt no hits

RFAM MIR1122: 0.0007
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;