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Species belonging to selected taxon:

Beta vulgaris, Mesembryanthemum crystallinum, Tamarix hispida



ABOUT THIS RECORD

ID: MNEST001545
species: Mesembryanthemum crystallinum
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACTG

miRNA*
GTTCAATAAAGCTGTGGGAAG

mismatches: 1
bulges: 0

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pre-miRNA
TATCAATACATATGGTCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATCTTCCCTAATTTTTTTATCTTTTGTTTTTCCTCTCTCAGATCCAATT
TTTTCTTTGGTAAATACTTATAATTTATCAAAAAAAAAAAAAGATGGATTTTTGGGAATTGAAAGATGGAAAATTTTAATTTGTGGGTTGCGGTTCAATA
AAGCTGTGGGAAG
ATACAAATAGGCCCAACAAAAATTCA


dot-bracket secondary structure
............(((.(((.((((((((.((((((((((((.((((((((((....(((.((.((((((((((((((...(((((.....(((((((.((
((((.((((((((((.......)))))))))).)))))).....)))))))..))))).)))))))))))))).))........))).)))))))))).)
))))))))))).)
))))))).))).)))...........



SIMILARITIES
miRBase lja-MIR396: 0.000000000000003

PMRD lja-miR396: 0.000000000000003

microPC miR396: 4e-33
UniProt no hits

RFAM MIR396: 0.000000000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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