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Species belonging to selected taxon:

Beta vulgaris, Mesembryanthemum crystallinum, Tamarix hispida



ABOUT THIS RECORD

ID: MNEST044946
species: Mesembryanthemum crystallinum
miRNA family: MIR396
source: microPC, original name: miR396

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACTT

miRNA*
GTTCAAGAAAGCTGTGGGA

mismatches: 0
bulges: 0

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pre-miRNA
TTCCACAGCTTTCTTGAACTTTCCGGTTCTTTTCTTCTTTTTTTTTCTTTCTAGTGAGAAACAAACCATCATTGGGAAAGTTCAAGAAAGCTGTGGGA

dot-bracket secondary structure
((((((((((((((((((((((((((((..((((((((..............)).))))))..)))).......))))))))))))))))))))))))


SIMILARITIES
miRBase tcc-MIR396c: 0.000005

PMRD bna-miR396a: 0.000005

microPC miR396: 1e-34
UniProt no hits

RFAM MIR396: 0.00008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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