ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: let-7
source: miRBase, original name: aga-let-7 (MI0001600)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGTAGTTGGTTGTATAGT miRNA* TATACAATCCGCTAACTTACC mismatches: 2 bulges: 0 |
pre-miRNA
GCCTACTCCCGTGTTGAGGTAGTTGGTTGTATAGTACCGTGGTTCCAATACTCGACTATACAATCCGCTAACTTACCTCGTGGGTAGAGT
dot-bracket secondary structure
((((((((.((.(.((((.((((.(((((((((((...(((.......)))...))))))))))).)))).)))).).)).)))))).))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
GCCTACTCCCGTGTTGAGGTAGTTGGTTGTATAGTACCGTGGTTCCAATACTCGACTATACAATCCGCTAACTTACCTCGTGGGTAGAGT
dot-bracket secondary structure
((((((((.((.(.((((.((((.(((((((((((...(((.......)))...))))))))))).)))).)))).).)).)))))).))
SIMILARITIES| miRBase aae-let-7: 0.000001 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 4e-34 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
