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Species belonging to selected taxon:

Anopheles gambiae, Anopheles stephensi



ABOUT THIS RECORD

ID: MNEST035283
species: Anopheles gambiae
miRNA family: mir-34
source: miRBase, original name: aga-mir-34 (MI0006239)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGCAGTGTGGTTAGCTGGT

miRNA*
CACTATCCGCCCTGCCGTC

mismatches: 2
bulges: 1

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pre-miRNA
GAGGCAATATACGCTCTGGCAGTGTGGTTAGCTGGTTGTGTGGTTTTCCCATCTTCACAGCCACTATCCGCCCTGCCGTCGCGCTAATGC

dot-bracket secondary structure
...(((.....(((..((((((.((((.(((.(((((((((((.....)))....))))))))))).)))).))))))..)))....)))


SIMILARITIES
miRBase aae-mir-34: 0.000000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-449: 8e-45

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"




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