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Species belonging to selected taxon:

Anopheles gambiae, Anopheles stephensi



ABOUT THIS RECORD

ID: MNEST035285
species: Anopheles gambiae
miRNA family: mir-87
source: miRBase, original name: aga-mir-87 (MI0008308)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGTGAGCAAATATTCAGGTGT

miRNA*
GCCTGAAATTTGCTAAACCTG

mismatches: 3
bulges: 2

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pre-miRNA
GATTTCTCTCGGCCCAGCCTGAAATTTGCTAAACCTGATACGTGTTCGAAACCAAGGTGAGCAAATATTCAGGTGTGTCGACGAGCGGTCACATTCGTCG


dot-bracket secondary structure
(((..((((((((...((((((((((((((..((((....((....))......)))).))))))).)))))))..))))).)))..)))..........



SIMILARITIES
miRBase aae-mir-87: 0.000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"




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