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Species belonging to selected taxon:
Centaurea solstitialis
ABOUT THIS RECORD
ID:
MNEST002957
species:
Centaurea solstitialis
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Centaurea solstitialis
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTACTCCCTCTGTCCCAAAAG
miRNA*
CTTGGACGGAGGGAGTAATG
mismatches:
2
bulges:
1
View larger
pre-miRNA
CTAGAATTTGT
GTACTCCCTCTGTCCCAAAAG
AGGTGTCCACTTTCAAACTACGGGATTGAGATACTCCTTACTCCACCTATAATCAAGGGCAAACTGTA
GAAACCCAAAACTGTGATAATTATACATCTCTAGAACTATGCCTTTCTCATCGCGTACATCTCT
CTTGGACGGAGGGAGTAATG
TATAAGAG
dot-bracket secondary structure
......(((((
(((((((((((((((.((.((
((((((.............(((.(((.((((........................((((((..(((.(
((..........((((.......))))))).))).....))))))))))))).)))))))))))
.))))))))))))))))...
))))))..
SIMILARITIES
miRBase
osa-MIR1862d
:
0.0006
PMRD
osa-miR1862d
:
0.0006
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.0007
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record