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Species belonging to selected taxon:

Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002958
species: Centaurea solstitialis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCACTGCTTCTTCCCTGGCT

miRNA*
ACAGGGACGAGACGGAGCCCG

mismatches: 5
bulges: 0

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pre-miRNA
TTTAATGGTATAGATGGAGATGTGAGGGTAGACAGGGACGAGACGGAGCCCGAAAAAGCCTAGTCAATACTTGGGTCAGTATTGTTGTCTTTTCATGCAC
TGCTTCTTCCCTGGCT
ATCCTCTTCTCTCTATACTCGTGTTGTT


dot-bracket secondary structure
......((((((((..((((...((((((((.((((((.(((.(((.((..(((((.((.....(((((((......)))))))..)).)))))..)).)
)).))).)))))).))
)))))).)))))))))))).........



SIMILARITIES
miRBase aqc-MIR408: 0.0001

PMRD aqc-miR408: 0.0001

microPC miR408: 0.0004
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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