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Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002953
species: Centaurea solstitialis
miRNA family: MIR530
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCATTTGCACCTGCACCTTT

miRNA*
GGGTGCAGGACAAGTGCAGG

mismatches: 1
bulges: 1

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pre-miRNA
TTGCCTTTGTCTGCATTTGCACCTGCACCTTTCTACCTTTCTTCTCCATCTTCATCTTCTTCACCACCATCATAAGACAATGTGTGTGTGTGTGTGTGTG
TGTGAGTAGGTGGAGAGGTTAAGAAGAAAAGAAGGGTGCAGGACAAGTGCAGGCTAAGACA


dot-bracket secondary structure
....(((.(((((((((((..(((((((((((((...((((((((((.(((((((((..(((((((((((((((..(((.....))).)))).))).)))
.))))).)))))))))))...))))))))))))))))))))).))))))))))).)))...



SIMILARITIES
miRBase ptc-MIR530a: 0.00000003

PMRD ptc-miRf11025-akr: 0.00000003

microPC miR1030: 5e-35
UniProt no hits

RFAM MIR530: 0.0000006
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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