miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Branchiostoma floridae



ABOUT THIS RECORD

ID: MNEST007124
species: Branchiostoma floridae
miRNA family: mir-296
source: miRNEST

Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGGGTTGGGCGGAGCCTCTG

miRNA*
GGGGCCCGTCATCACCTTCCT

mismatches: 3
bulges: 2

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pre-miRNA
GCGCGGCCAAGGGGCCCGTCATCACCTTCCTGGACGCTCATATTGAGTGCACAGAGGGTTGGGCGGAGCCTCTGTTGGCAA

dot-bracket secondary structure
.....(((((((((((((((...((((((.((..((((((...))))))..))))))))..))))).))))))..))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q6UE39|GLT13_RAT: 0.00003

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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