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Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Macaca nemestrina, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST028194
species: Macaca nemestrina
miRNA family: mir-31
source: miRBase, original name: mne-mir-31 (MI0002675)

Taxonomy by NCBI:
Macaca nemestrina Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGCAAGATGCTGGCATAGCTG

miRNA*
TGCTATGCCAACATATTGCCAT

mismatches: 3
bulges: 0

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pre-miRNA
GGAGAGGAGGCAAGATGCTGGCATAGCTGTTGAACTGGGAACCTGCTATGCCAACATATTGCCATCTTTCC

dot-bracket secondary structure
((((((..(((((.(((.(((((((((.(((........)))..))))))))).))).)))))..))))))


SIMILARITIES
miRBase mml-mir-31: 7e-35

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-31: 5e-33

Identical with: ppy-mir-31 from miRBase (MNEST030787)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E, Cell. 120:21-24(2005)., "Phylogenetic shadowing and computational identification of human microRNA genes"




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