miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cichorium intybus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Taraxacum kok-saghyz, Taraxacum officinale, Cichorium endivia



ABOUT THIS RECORD

ID: MNEST002699
species: Taraxacum officinale
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Taraxacum officinale Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTGCT

miRNA*
CAGATGAACTCGGGTGATGGGT

mismatches: 4
bulges: 1

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pre-miRNA
CAATGACACTTGTGAATGCTCCTCCTGTTCAGCAGATGAACTCGGGTGATGGGTATCAAGAATCATCATCATCATCATCTGCTAATGGCCATGAACATCA
TACTAATTTGGA


dot-bracket secondary structure
......((....))..........(((((.(((((((((.....((((((((..........))))))))....))))))))))))))..((((...)))
)...........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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