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Species belonging to selected taxon:

Taraxacum kok-saghyz, Taraxacum officinale



ABOUT THIS RECORD

ID: MNEST002703
species: Taraxacum officinale
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Taraxacum officinale Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTTTGGGACGGAGGGAGT

miRNA*
CCATCTTTTCTTTAAATGACA

mismatches: 3
bulges: 2

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pre-miRNA
TCATTAGTTAACTTCCAATCTTGTAATGGTTATACCCATCTTTTCTTTAAATGACACTTATTAGACAGTCTGGGTTAATATTTCAACAATTCTTATCGTT
AACACGGGATTGAAGCAGACTATTCATCTTCTTTGCATCACCATGATATCTTGTTTGCAAGCAAAGCATAGATAAGGAGTTATCAAAGAAGCTTCATTGG
ATTTGCTGCCTATCTCTCAAAGAGGAAAAACAAAAGTTGGCTGGGAAGTTTCAGTGACCAAAGACTATTATTTTGGGACGGAGGGAGTATTATAATGAAG
ACGTTTGGAGTTTTGGTTAT


dot-bracket secondary structure
........((((((((((...(((.((.((.((((((.(((.((((..((((((..((....))..(((((.(((((..(((((..(((((((.......
.....))))))).(((((((((.....((((((((.......(((((.((((((((((.......)))..))))))).)))))))))))))......)))
.))))))(((..(((((...)))))...(((....))))))...))))).....)))))..))))).)))))).)))).))).)).)))).)).))....
))).))))).....))))).



SIMILARITIES
miRBase osa-MIR1862e: 0.00002

PMRD osa-miRf10302-akr: 0.00002

microPC miR1439: 0.000004
UniProt no hits

RFAM MIR1122: 0.000005
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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