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Species belonging to selected taxon:

Taraxacum kok-saghyz, Taraxacum officinale



ABOUT THIS RECORD

ID: MNEST045587
species: Taraxacum officinale
source: microPC, original name: miR156

Taxonomy by NCBI:
Taraxacum officinale Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GACAGAAGAGAGTGAGCA

miRNA*
CTCACTTCTCTTGCTGTC

mismatches: 0
bulges: 2

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pre-miRNA
GACAGAAGAGAGTGAGCATATGCAAGCAATTGTATAGAGAGATATGCTCTTGTTGTAATTATGATGCGTGTGCTCACTTCTCTTGCTGTC

dot-bracket secondary structure
(((((((((((((((((((((((((((((..(((((......)))))..)))))..........))))))))))))).)))))).)))))


SIMILARITIES
miRBase vvi-MIR156d: 0.000004

PMRD vvi-miR156d: 0.000004

microPC miR156: 4e-46
UniProt no hits

RFAM mir-156: 0.00008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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