ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-988
source: miRBase, original name: aga-mir-988 (MI0010598)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCCTTGTTGCAAACCTCACGC miRNA* GTGTGTTTTGTGACAATGAGAT mismatches: 9 bulges: 0 |
pre-miRNA
CTGTGGAGCATTGGACATTGCCGGTGTGTGTTTTGTGACAATGAGATTTAATAGTTTAAGTTCATCCCCTTGTTGCAAACCTCACGCTGGCGGTGTTTCC
GA
dot-bracket secondary structure
...((((......(((((((((((((((.(.((((..(((((((.((((((....)))))))))).....)))..)))).).))))))))))))))))))
).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
CTGTGGAGCATTGGACATTGCCGGTGTGTGTTTTGTGACAATGAGATTTAATAGTTTAAGTTCATCCCCTTGTTGCAAACCTCACGCTGGCGGTGTTTCC
GA
dot-bracket secondary structure
...((((......(((((((((((((((.(.((((..(((((((.((((((....)))))))))).....)))..)))).).))))))))))))))))))
).
SIMILARITIES| miRBase cqu-mir-988: 0.0000000003 PMRD no hits microPC no hits | UniProt no hits RFAM mir-988: 2e-49 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
