miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Anopheles stephensi, Polypedilum vanderplanki



ABOUT THIS RECORD

ID: MNEST035280
species: Anopheles gambiae
miRNA family: mir-12
source: miRBase, original name: aga-mir-12 (MI0006240)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGTATTACATCAGGTACTGGT

miRNA*
CAGTACTTGTGTTATACTCTCC

mismatches: 2
bulges: 1

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pre-miRNA
CCGGGGTGAGTATTACATCAGGTACTGGTGTGTAATTTAAACGACCATCGGACATGGGGGCTGCCCAACTCCTCTTCTGTCCCCGGTCAAGCTATCAGTA
CTTGTGTTATACTCTCC


dot-bracket secondary structure
....((.((((((.(((.((((((((((((.((........((.....))(((.(((((((.................))))))))))..))))))))))
))))))).)))))).))



SIMILARITIES
miRBase ame-mir-12: 0.00000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-12: 0.0000004

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"




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