ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-190
source: miRBase, original name: aga-mir-190 (MI0010594)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGATATGTTTGATATTCTTGGTTG miRNA* CCCAGGAATCAAACATATTATTA mismatches: 1 bulges: 3 |
pre-miRNA
TGTTTGGTGGGACAGTTTCGGTGAGATATGTTTGATATTCTTGGTTGTTAAGATTTCAATTATCACCCAGGAATCAAACATATTATTACCGTGACTGTCG
T
dot-bracket secondary structure
..........(((((((.((((((((((((((((((..((((((.((.(((........))).)).)))))))))))))))))).)))))).))))))).
.
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
TGTTTGGTGGGACAGTTTCGGTGAGATATGTTTGATATTCTTGGTTGTTAAGATTTCAATTATCACCCAGGAATCAAACATATTATTACCGTGACTGTCG
T
dot-bracket secondary structure
..........(((((((.((((((((((((((((((..((((((.((.(((........))).)).)))))))))))))))))).)))))).))))))).
.
SIMILARITIES| miRBase aae-mir-190: 4e-25 PMRD no hits microPC no hits | UniProt no hits RFAM mir-190: 2e-45 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
