miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Anopheles stephensi, Polypedilum vanderplanki



ABOUT THIS RECORD

ID: MNEST035308
species: Anopheles gambiae
miRNA family: mir-286
source: miRBase, original name: aga-mir-286 (MI0010605)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACTAGACCGAACACTCGCGTC

miRNA*
CGATTGTCGGACTAGTCGCT

mismatches: 3
bulges: 3

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pre-miRNA
GTCATAATTTGGGGCGATTGTCGGACTAGTCGCTGTCGCAGTCATTCGGTTTCACCTTAGTGACTAGACCGAACACTCGCGTCCTAAACGAACGAC

dot-bracket secondary structure
(((....(((((((((..((((((.((((((((((..(.(..(....)..).)....)))))))))).))).)))....))))))))).....)))


SIMILARITIES
miRBase aae-mir-286a: 0.00000000008

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-286: 5e-40

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Griffiths-Jones S, Unpublished (2009).,




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