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Species belonging to selected taxon:
Aedes aegypti
,
Culex quinquefasciatus
,
Anopheles gambiae
,
Anopheles stephensi
ABOUT THIS RECORD
ID:
MNEST035299
species:
Anopheles gambiae
miRNA family:
mir-275
source:
miRBase, original name:
aga-mir-275
(
MI0001613
)
Taxonomy by NCBI:
Anopheles gambiae
gambiae species complex
Pyretophorus
Cellia
Anopheles
Anophelinae
Culicidae
Culicoidea
Culicimorpha
Nematocera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCAGGTACCTGAAGTAGCGCGCG
miRNA*
CGCGCTAAGCAGGAACCGGGACT
mismatches:
5
bulges:
2
View larger
pre-miRNA
TGAGCCGTCTAATGACA
CGCGCTAAGCAGGAACCGGGACT
TGGTACACATTCGCTAGCAG
TCAGGTACCTGAAGTAGCGCGCG
TTATTCGGCTCA
dot-bracket secondary structure
.((((((...((((((.
(((((((..((((.(((..((((
((((........))))..))
)).))).))))...))))))).)
))))))))))).
SIMILARITIES
miRBase
cqu-mir-275
:
6e-24
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-275: 2e-45
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Winter F, Edaye S, Huttenhofer A, Brunel C,
Nucleic Acids Res. 35:6953-6962(2007).
,
"Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"