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Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Anopheles stephensi



ABOUT THIS RECORD

ID: MNEST035316
species: Anopheles gambiae
miRNA family: mir-375
source: miRBase, original name: aga-mir-375-1 (MI0008310)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGTTCGTTTGGCTCGAGTTA

miRNA*
ACTTAAGCCACGCGTACAGAAA

mismatches: 5
bulges: 0

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pre-miRNA
TGTTGCGATGAGACAGAATTTGGATTACTTAAGCCACGCGTACAGAAACTTTTTAGAATGAAAGAGTTTGTTCGTTTGGCTCGAGTTATGCCGGTTCTAA
ATTGCAGCA


dot-bracket secondary structure
.((((((((.....(((((..(.((.(((..(((((.(((.(((((..(((((......)))))..))))).))).)))))..))).)).)..)))))..
)))))))).



SIMILARITIES
miRBase aga-mir-375-2: 3e-57

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

Identical with: aga-mir-375-2 from miRBase (MNEST035317)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"




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