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Species belonging to selected taxon:
Cycas rumphii
,
Zamia vazquezii
ABOUT THIS RECORD
ID:
MNEST002837
species:
Zamia vazquezii
miRNA family:
MIR535
source:
miRNEST
Taxonomy by NCBI:
Zamia vazquezii
Zamia
Zamiaceae
Cycadales
Cycadopsida
Cycadophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAACGAGAGAGAGCACGC
miRNA*
GTTCTCCCTCCCGTTGCCATC
mismatches:
4
bulges:
0
View larger
pre-miRNA
GTTGTATGGAG
TGACAACGAGAGAGAGCACGC
TTGTCAGCATGTATGTAAAGCACATCAGTGTTTACAGGC
GTTCTCCCTCCCGTTGCCATC
CCGCCTGA
dot-bracket secondary structure
......(((.(
((.(((((.(((.(((.((((
((((.(((((..((((.....))))..))))).))))))
)).))).))).))))).))).
))).....
SIMILARITIES
miRBase
vvi-MIR535b
:
0.00000002
PMRD
vvi-miR535c
:
0.00000002
microPC
miR535
:
0.0000003
UniProt
no hits
RFAM
MIR535: 0.000000006
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record