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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis



ABOUT THIS RECORD

ID: MNEST000148
species: Arachis ipaensis
miRNA family: MIR162
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCGATAAACCTCTGCATCCAG

miRNA*
GGAGGCAGCGGTTCATCGATC

mismatches: 4
bulges: 0

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pre-miRNA
AATTTGTAAGGTGAAGTCACTGGAGGCAGCGGTTCATCGATCTCTTCCTGAAATTTGGCTGTGGAATCCTACACAAAGCAAGAATCGGGCGATAAACCTC
TGCATCCAG
CGCTCCACTTTGCCTCTT


dot-bracket secondary structure
.....((((((((.(((..(((((.((((.((((.((((.((..(((.((...((((...((((....)))).)))).)).)))..)).)))).)))).)
))).)))))
.))).)))))))).....



SIMILARITIES
miRBase vvi-MIR162: 4e-16

PMRD vvi-miR162: 4e-16

microPC miR162: 2e-27
UniProt no hits

RFAM MIR162_2: 0.00000000003
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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