miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Paracentrotus lividus, Strongylocentrotus purpuratus, Patiria pectinifera



ABOUT THIS RECORD

ID: MNEST009087
species: Patiria pectinifera
miRNA family: miR-466l
source: miRNEST

Taxonomy by NCBI:
Patiria pectinifera Patiria Asterinidae Valvatida Valvatacea Asteroidea Asterozoa Eleutherozoa Echinodermata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCTGTGTACATGTACATGTA

miRNA*
TGTGTAAAAGTATGCAATAA

mismatches: 4
bulges: 1

View larger
pre-miRNA
CTAACAGCCCAATGTGTAAAAGTATGCAATAAATTACAATACTGTATTTCTCAATTCGCAAACAATGTTCATGTTTCCCGTCCACCGAGTAAATACATGT
AAGATCTGTGTACATGTACATGTACCCCTTTTC


dot-bracket secondary structure
...........(((((((...(((((((((...(((((....((((((((((....((.(((((.......)))))..))......))).))))))))))
)).)).)))))))...)))))))..........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;