miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Trichinella spiralis, Trichinella pseudospiralis



ABOUT THIS RECORD

ID: MNEST009504
species: Trichinella spiralis
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Trichinella spiralis Trichinella Trichinellidae Trichocephalida Enoplia Enoplea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGCTGCTGCTGTTGCTGCT

miRNA*
TCAGCAACAGTTCCAGTGGCAG

mismatches: 2
bulges: 1

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pre-miRNA
CCGCTGCTTTTGCTGCTGCTGCTGTTGCTGCTGCTCTTTTGCCATTTCTCTTCACACGCTTTCCATTCTCCCAGGCAAAATACAATTTGATGAACACGTT
TGTTGATCAAAAAGAAGAAGTGATTTTTTCAAAAAGCCGGTCAGCAACAGTTCCAGTGGCAGATCAGATT


dot-bracket secondary structure
...(((..((((((((((..(((((((((((((((.(((((((..............................))))))).....((((((.((((....
)))).))))))..((((((.....))))))....)).))).))))))))))..)))))))))).)))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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