ABOUT THIS RECORDspecies: Trichinella spiralis
miRNA family: miR-87
source: miRNEST
Taxonomy by NCBI:
Trichinella spiralis Trichinella Trichinellidae Trichocephalida Enoplia Enoplea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCCTGGAACTTTCGTCTCAG miRNA* GAGCAAAGTTTCAGGTGTG mismatches: 1 bulges: 2 |
pre-miRNA
GGAAGAAGGCCTTTTGCCTGGCGCCTGGAACTTTCGTCTCAGCCTTAGATTTTGACAAGGTGAGCAAAGTTTCAGGTGTGTCGGCGAACAGGCAATAT
dot-bracket secondary structure
........((((((((((..((((((((((((((.(.((((.((((..........)))))))))))))))))))))))...)))))).)))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGAAGAAGGCCTTTTGCCTGGCGCCTGGAACTTTCGTCTCAGCCTTAGATTTTGACAAGGTGAGCAAAGTTTCAGGTGTGTCGGCGAACAGGCAATAT
dot-bracket secondary structure
........((((((((((..((((((((((((((.(.((((.((((..........)))))))))))))))))))))))...)))))).)))).....
SIMILARITIES| miRBase aae-mir-87: 0.00000002 PMRD no hits microPC no hits | UniProt no hits RFAM mir-87: 9e-45 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
