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Species belonging to selected taxon:

Lottia gigantea



ABOUT THIS RECORD

ID: MNEST007343
species: Lottia gigantea
miRNA family: miR-3407
source: miRNEST

Taxonomy by NCBI:
Lottia gigantea Lottia Lottiidae Acmaeioidea Nacellina Docoglossa Eogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAACTGGGAGAGACTGGAAGA

miRNA*
TATCAGATTCCTACCAGTTACA

mismatches: 5
bulges: 1

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pre-miRNA
TAAAAAGCAGGAAGTTGAAGATAACTGGGAGAGACTGGAAGATCTTTCTGATCAAAGAAAAGCCAAATTATCAGATTCCTACCAGTTACAGAAATTCTTA
TCAGATGG


dot-bracket secondary structure
........(((((.(((....(((((((..(((.((((.((...(((((......))))).......)).)))).)))...))))))))))...))))).
........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q13813|SPTA2_HUMAN: 0.0004

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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