miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Drosophila simulans, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Drosophila mojavensis, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST009854
species: Drosophila yakuba
miRNA family: miR-2444
source: miRNEST

Taxonomy by NCBI:
Drosophila yakuba melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGTGGTGTGTTTTGTTTTG

miRNA*
AACTGTTTGCACTTCAAGCG

mismatches: 4
bulges: 1

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pre-miRNA
ATTCCCCTCTGTTTGTGGTGTGTTTTGTTTTGTTTTTTTTTTTTTGGGTTTGCGAATGAATCCGTTAGTTGGATGGTTTTGATTTAAAATTCACTTTTTA
ATCACTGGATTATTTTGGGCCCCCCTGAACTTTGAGGTCGTCCACGTTCCGTTCACTTTGCACGTTCTTTGCAAACTGTTTGCACTTCAAGCGGAAAGCT
T


dot-bracket secondary structure
.......((((((((.((((((...((.(((((............(((..((((((((((.(((((.....)))))...(((((.((((.....)))).)
)))).((((......(((((...(((........)))..)))))...)))))))).))))))...)))..))))).))..)))))).)))))))).....
.



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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