miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Esox lucius



ABOUT THIS RECORD

ID: MNEST009406
species: Esox lucius
miRNA family: miR-2444
source: miRNEST

Taxonomy by NCBI:
Esox lucius Esox Esocidae Esociformes Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTTGTTGTTTTTTTTTTTG

miRNA*
AAAGGTTAAAATATCAGAAGCA

mismatches: 2
bulges: 1

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pre-miRNA
AACAAATGTTTTTTTTGTTGTTTTTTTTTTTGCTGGAGACATCACGTGATGTGGTGTAACTTTCTAATGAATGTTTTAGCCATTTTCATGGTGGAAGAAT
TTTATATTTATGCAGTTGTACAATTTTTTTCACAGGAAAAAGTTTAATGTATGAATCCAATACCAAAGTCACTGGTGAAAGGTTAAAATATCAGAAGCAA
TGCAGTA


dot-bracket secondary structure
.......(((.((((((.((((((.(((((((((((.(((....(((((.(((((..(((.(((....))).)))...)))))..))))).(((......
.....(((((((((....((.((((((((((...)))))))))))).)))))))))......)))..))).)))))))))))..)))))).)))))).))
)......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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