ABOUT THIS RECORDspecies: Esox lucius
miRNA family: mir-219
source: miRNEST
Taxonomy by NCBI:
Esox lucius Esox Esocidae Esociformes Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATTGTCCAAACGCAATTTT miRNA* AGTTGTGTATGGACATCATT mismatches: 1 bulges: 1 |
pre-miRNA
TGGGACTGGGGAGTTTGGAGCTGATTGTCCAAACGCAATTTTTGAGTCTGCCTAATGCTAATCCAGGAGTTGTGTATGGACATCATTCTTCAAACTCTCA
CTCAC
dot-bracket secondary structure
((((....((((((((((((.((((.(((((.((((((((((((.((..((.....))..)).)))))))))))).)))))))))..)))))))))))).
)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGGACTGGGGAGTTTGGAGCTGATTGTCCAAACGCAATTTTTGAGTCTGCCTAATGCTAATCCAGGAGTTGTGTATGGACATCATTCTTCAAACTCTCA
CTCAC
dot-bracket secondary structure
((((....((((((((((((.((((.(((((.((((((((((((.((..((.....))..)).)))))))))))).)))))))))..)))))))))))).
)))).
SIMILARITIES| miRBase fru-mir-219-2: 0.000000000005 PMRD no hits microPC no hits | UniProt no hits RFAM mir-219: 0.00000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
