miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Peromyscus polionotus subgriseus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST004972
species: Mus musculus
miRNA family: miR-3533
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGAAGTGTGATGTGGATAT

miRNA*
ATTCATGAGAACACTTTCAAC

mismatches: 5
bulges: 1

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pre-miRNA
GGAGTCCTGTGGTATTCATGAGAACACTTTCAACTCCATCATGAAGTGTGATGTGGATATCCGCAAGAAC

dot-bracket secondary structure
....((.(((((((((((((...(((((((............)))))))..)))))))).))))).))..


SIMILARITIES
miRBase gga-mir-3533: 4e-18

PMRD no hits

microPC no hits
UniProt sp|Q6P378|ACTG_XENTR: 0.000007

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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