miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Eucalyptus globulus
,
Eucalyptus gunnii
ABOUT THIS RECORD
ID:
MNEST000580
species:
Eucalyptus gunnii
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Eucalyptus gunnii
Eucalyptus
Myrtaceae
Myrtales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCTTCTTGT
miRNA*
GAGACGAGGAAGAAGAGAGAAG
mismatches:
5
bulges:
1
View larger
pre-miRNA
GCTGCTTAAAAC
GAGACGAGGAAGAAGAGAGAAG
GGGTGGTACTGATTCTAGTTATACATCTCTGCTGAAGATGTTCAGAAGCTCGAGATTT
TCATCATC
ATCATCTTCTTGT
TTTTTGCCC
dot-bracket secondary structure
...((..(((((
((((.((.((.((.((..((((
(.(((..((((....))))..))).((((.(((.............)))..)))))))
)).)).))
.)).)).))))))
)))..))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record