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Species belonging to selected taxon:
Euphorbia esula
ABOUT THIS RECORD
ID:
MNEST000597
species:
Euphorbia esula
miRNA family:
MIR171
source:
miRNEST
Taxonomy by NCBI:
Euphorbia esula
Euphorbia
Euphorbieae
Euphorbioideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGATATTGGTGCGGTTCAATC
miRNA*
TTGAGCCGTGCCAATATCACG
mismatches:
1
bulges:
0
View larger
pre-miRNA
TCATGGGAGAAAAAATAACCAAAATACG
AGATATTGGTGCGGTTCAATC
GGAGAACTTTGCTCTTTGTTTAGAGAGCTATGTTGTTTGA
TTGAGCCGTGC
CAATATCACG
TATGAATTAAAATTTATTTCTTTCT
dot-bracket secondary structure
....((((((((.((........(((((
.((((((((((((((((((((
(((.(((...(((((((....)))))))...))).)))))
)))))))))))
))))))).))
)))..........)).)))))))).
SIMILARITIES
miRBase
rco-MIR171b
:
8e-18
PMRD
ptc-miR171b
:
0.000000000007
microPC
miR171
:
3e-42
UniProt
no hits
RFAM
MIR171_1: 1e-16
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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