miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000087
species: Arachis duranensis
miRNA family: MIRf493
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCGGACCACGCTTCATTCCC

miRNA*
 GAATGTTGTCTGGCTCGAGAG

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TTCTTCTTCTTCTTCATGAGGGAGGTGGTGGCTGCTTCTGCTGCAAAGGTTAAGGTTGAGAGGAATGTTGTCTGGCTCGAGAGGTCTTATTAGCTTCATG
AATTGTTTGATTTGATGATGATTAGTCAAAGTGACTAATAATCTCGGACCACGCTTCATTCCCCCCATCCAACCTTTGCTATATGCTTCTGCTTCTGCTT
GCTTCCACTTTCTTTTTAATGT

dot-bracket secondary structure
.................(((((((((((.(((.((....((.(((..(((.(((((((.((((((((..((.(((.((((((.(((..(((((...((..
...)).)))))..)))....((((((((...))))))))..)))))).))).))..)))))).....))))))))).)))...)))....))....))..
))).))))))))))).......


SIMILARITIES
miRBase ptc-MIR166q: 0.000000003

PMRD pvu-miR166: 0.000000003

microPC miR166: 0.0002		UniProt no hits

RFAM mir-166: 0.0000009		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;