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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040667
species: Medicago truncatula
miRNA family: MIR164
source: miRBase, original name: mtr-MIR164d (MI0005617)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACATGCT

miRNA*
CATGTGCTCTTGCTCTCCATC

mismatches: 0
bulges: 2

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pre-miRNA
CACGTTGGAGAAGCAGGGCACATGCTTGATTTTATCAAAGTTCTGAGCATGTGCTCTTGCTCTCCATCATGG

dot-bracket secondary structure
((.(.((((((.((((((((((((((((((((.....)))))..)))))))))).))))))))))).).)).


SIMILARITIES
miRBase rco-MIR164d: 0.000003

PMRD vvi-miR164b: 0.00005

microPC no hits
UniProt no hits

RFAM MIR164: 3e-34

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
degradome data
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references

[1] Bonnet E, Unpublished (2007).,




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