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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040690
species: Medicago truncatula
miRNA family: MIR169_2
source: miRBase, original name: mtr-MIR169m (MI0005630)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAGCCAAGGATGACTTGCCGG

miRNA*
 GGCAGGTCATCCTTCGGCTATA

mismatches: 1
bulges: 1
View larger
pre-miRNA
 AAATGGAGCCAAGGATGACTTGCCGGTATATTAGTTTGTCGCTAAAGCTAACTAGCTTTAGTTGTTGGGTACTCCCGGCAGGTCATCCTTCGGCTATATT


dot-bracket secondary structure
.((((.((((((((((((((((((((..((((........(((((((((....))))))))).....))))...)))))))))))))))).)))).))))



SIMILARITIES
miRBase mtr-MIR169e: 5e-52

PMRD osa-miR169b: 0.000005

microPC miR169: 0.00002		UniProt no hits

RFAM MIR169_2: 9e-51

Identical with: mtr-MIR169e from miRBase (MNEST040682)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
degradome data
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references
[1] Bonnet E, Unpublished (2007).,



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