miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST040697
species: Medicago truncatula
miRNA family: MIR171_1
source: miRBase, original name: mtr-MIR171c (MI0005597)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATTGAGCCGTGCCAATATT

miRNA*
 TATTGGCTTGGTTCACTCAGA

mismatches: 2
bulges: 0
View larger
pre-miRNA
 ATTGAGATATTGGCTTGGTTCACTCAGAAGAAACAAAAAATAACACTACTTGTGAATGTTTTGATTTTGATTTTGATTTTGATTGAGCCGTGCCAATATT
TCAAA

dot-bracket secondary structure
.(((((((((((((.(((((((.(((((((((((((((.....(((.....)))....))))).))))........)))))).))))))).)))))))))
)))).


SIMILARITIES
miRBase mtr-MIR171g: 0.00002

PMRD mtr-miR171g: 0.00002

microPC no hits		UniProt no hits

RFAM MIR171_1: 1e-25

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Bonnet E, Unpublished (2007).,



Liczniki na strone;