miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008375
species: Medicago truncatula
miRNA family: MIR2604
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAATTTTTATGTGGGAGTGTT

miRNA*
TACTCCTTCTAAAAAATAAGT

mismatches: 5
bulges: 0

View larger
pre-miRNA
AACACATCCACTAATTTTTATGTGGGAGTGTTTTAGCAAAGCTATAACTTAGAGTGTATTTAACCACTGTTTAGTTATTTATTTGCTAAAATACTCCTTC
TAAAAAATAAGT
GG


dot-bracket secondary structure
.......(((((.((((((....(((((((((((((((((...((((((.((((((........)))).)).))))))...)))))))))))))))))..
..)))))).)))
))



SIMILARITIES
miRBase mtr-MIR2604: 3e-60

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: mtr-MIR2604 from miRBase (MNEST040836)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;